I guess this question relates to giving the technical file to the NB while the design project is still in process, not yet actually released to market.
In theory this is OK. In Europe the most common approach (Annex II, Annex V) is not product approval, rather quality system approval. The NB should be able to see enough to have sufficient confidence in the quality system.
The NB may be reasonably interested in certain subjects (critical design aspects, protection features) and needs to see these complete in order to judge if the quality system meets the requirements.
Some NBs insist on a separate technical file review for each device, and make this appear as pre-market approval. Since this is not required by the regulations, it is really up to the NB to set the rules/requirements for this process, such as whether open items are allowed. And it may be possible to challenge this since it is outside of the regulation. The separate review itself is OK, but the law only applies when the product is placed on the market.
Having worked in this area for a long time, it is clear that when manufacturers have to deal with pre-market processes (e.g FDA, Health Canada), what they usually do is have special technical file for the regulators. This file is is fairly simple and shows everything is OK, even though in fact the designers are still ironing out the bugs, refining risk based decisions, tests are just on prototypes, software keeps crashing: in other words far from representative of the final medical device. This approach is needed because the pre-market approval process can often take months. If the design was really complete, the manufacturer would just have to sit idle while waiting for regulatory clearance. It shows how the Europeans were smarter by avoiding pre-market approval in most cases. Unfortunately some NBs don't understand this and try to act as de facto pre-market approvers.
Instead, the regulators should focus on sampling files from products that are already on the market, with appropriate penalties to act as an incentive for manufacturers to get thing right in the pre-market stage.